tapsap package

Subpackages

• tapsap.diffusion package
  • Submodules
  • tapsap.diffusion.calculate_residence_time module
    • calculate_residence_time()
  • tapsap.diffusion.grahams_law module
    • grahams_law()
  • tapsap.diffusion.opt_sdc module
    • opt_sdc()
  • tapsap.diffusion.standard_diffusion_curve module
    • standard_diffusion_curve()
  • Module contents
• tapsap.file_io package
  • Submodules
  • tapsap.file_io.experiment_to_df module
    • experiment_to_df()
  • tapsap.file_io.reactor_to_df module
    • reactor_to_df()
  • tapsap.file_io.read_tdms module
    • read_tdms()
  • tapsap.file_io.read_xlsx module
    • read_xlsx()
  • tapsap.file_io.transient_to_xlsx module
    • transient_to_xlsx()
  • tapsap.file_io.transient_to_xlsx_summary module
    • transient_to_xlsx_summary()
  • tapsap.file_io.write_xlsx module
    • write_xlsx()
  • Module contents
• tapsap.moments_analysis package
  • Submodules
  • tapsap.moments_analysis.active_sites_by_pulse module
    • active_sites_by_pulse()
  • tapsap.moments_analysis.diffusion_moments module
    • diffusion_moments()
  • tapsap.moments_analysis.isreversible module
    • isreversible()
  • tapsap.moments_analysis.min_mean_max module
    • min_mean_max()
  • tapsap.moments_analysis.moments module
    • moments()
  • tapsap.moments_analysis.reactivities_product module
    • reactivities_product()
  • tapsap.moments_analysis.reactivities_reactant module
    • reactivities_reactant()
  • tapsap.moments_analysis.rtd_parameters module
    • rtd_parameters()
  • Module contents
• tapsap.plot package
  • Submodules
  • tapsap.plot.plot_tap module
    • plot_tap()
  • tapsap.plot.plot_tap_3D module
  • Module contents
• tapsap.preprocess package
  • Submodules
  • tapsap.preprocess.baseline_correction module
    • baseline_correction()
  • tapsap.preprocess.baseline_gamma module
    • baseline_gamma()
  • tapsap.preprocess.calibration_coef module
    • calibration_coef()
  • tapsap.preprocess.calibration_teak module
    • calibration_teak()
  • tapsap.preprocess.smooth_flux_gam module
    • smooth_flux_gam()
  • tapsap.preprocess.tap_mix module
    • tap_mix()
  • tapsap.preprocess.tap_mix_opt module
    • tap_mix_opt()
  • Module contents
• tapsap.structures package
  • Submodules
  • tapsap.structures.Experiment module
    • Experiment
      • Experiment.calibrate_all_species()
      • Experiment.make_copy()
      • Experiment.rate_reactivity_data()
      • Experiment.remove_delay_time()
      • Experiment.set_reactor_params()
  • tapsap.structures.Reactor module
    • Reactor
  • tapsap.structures.Transient module
    • Transient
      • Transient.baseline_correct()
      • Transient.calibrate_flux()
      • Transient.grahams_law()
      • Transient.remove_delay_time()
      • Transient.set_accumulation()
      • Transient.set_concentration()
      • Transient.set_gas_diffusion()
      • Transient.set_min_mean_max()
      • Transient.set_moments()
      • Transient.set_rate()
      • Transient.set_reactivities()
      • Transient.set_rtd_parameters()
      • Transient.smooth_flux()
  • Module contents
• tapsap.tapsolver package
  • Submodules
  • tapsap.tapsolver.Simulation module
    • Simulation
      • Simulation.to_reactor()
  • tapsap.tapsolver.read_tapsolver_input module
    • read_tapsolver_input()
  • tapsap.tapsolver.read_tapsolver_output module
    • read_tapsolver_output()
  • tapsap.tapsolver.write_tapsolver_input module
    • write_tapsolver_input()
  • Module contents
• tapsap.tests package
  • Submodules
  • tapsap.tests.test_diffusion module
    • TestDiffusion
      • TestDiffusion.setUp()
      • TestDiffusion.test_calculate_residence_time()
      • TestDiffusion.test_grahams_law_greater_than()
      • TestDiffusion.test_grahams_law_less_than()
      • TestDiffusion.test_opt_sdc()
      • TestDiffusion.test_standard_diffusion_curve()
  • tapsap.tests.test_file_io module
    • TestFileIO
      • TestFileIO.setUp()
      • TestFileIO.test_experiment_to_df()
      • TestFileIO.test_reactor_to_df()
      • TestFileIO.test_read_tdms()
      • TestFileIO.test_transient_to_xlsx()
      • TestFileIO.transient_to_xlsx_summary()
  • tapsap.tests.test_moments module
    • TestMoments
      • TestMoments.setUp()
      • TestMoments.test_caclulate_moments_no_options()
      • TestMoments.test_caclulate_moments_with_integration_time()
      • TestMoments.test_diffusion_moments()
      • TestMoments.test_diffusion_moments_new_mass()
      • TestMoments.test_isreversible_false()
      • TestMoments.test_isreversible_true()
      • TestMoments.test_min_mean_max()
      • TestMoments.test_reactivities_product()
      • TestMoments.test_reactivities_reactant_irreversible()
      • TestMoments.test_reactivities_reactant_reversible()
      • TestMoments.test_rtd_parameters()
  • tapsap.tests.test_preprocess module
    • TestPreprocess
      • TestPreprocess.setUp()
      • TestPreprocess.test_baseline_correction_given_range()
      • TestPreprocess.test_baseline_correction_given_value()
      • TestPreprocess.test_baseline_correction_no_options()
      • TestPreprocess.test_baseline_gamma()
      • TestPreprocess.test_calibration_coef()
      • TestPreprocess.test_calibration_teak()
      • TestPreprocess.test_smooth_flux_gam()
      • TestPreprocess.test_tap_mix()
      • TestPreprocess.test_tap_mix_huber()
      • TestPreprocess.test_tap_mix_opt()
  • tapsap.tests.test_structures module
    • TestStructures
      • TestStructures.setUp()
      • TestStructures.test_baseline_correct()
      • TestStructures.test_baseline_correct_amount()
      • TestStructures.test_calibrate_flux()
      • TestStructures.test_calibrate_flux_pulse()
      • TestStructures.test_set_moments()
      • TestStructures.test_set_rtd_parameters()
      • TestStructures.test_transient_set_min_mean_max()
  • tapsap.tests.test_transient_analysis module
    • TestTransientAnalysis
      • TestTransientAnalysis.setUp()
      • TestTransientAnalysis.test_concentration_g()
      • TestTransientAnalysis.test_concentration_units()
      • TestTransientAnalysis.test_concentration_y()
      • TestTransientAnalysis.test_rate_g()
      • TestTransientAnalysis.test_rate_y()
      • TestTransientAnalysis.test_uptake()
  • tapsap.tests.test_utils module
    • TestUtils
      • TestUtils.setUp()
      • TestUtils.test_filter_xl()
      • TestUtils.test_find_integration_time()
      • TestUtils.test_gamma_pdf()
      • TestUtils.test_isfloat_false()
      • TestUtils.test_isfloat_true()
      • TestUtils.test_isint_false()
      • TestUtils.test_isint_true()
      • TestUtils.test_isjson_true()
      • TestUtils.test_islist_false()
      • TestUtils.test_islist_true()
      • TestUtils.test_mad()
      • TestUtils.test_rmse()
      • TestUtils.test_trapz_full_time()
      • TestUtils.test_trapz_full_time_first_moment()
      • TestUtils.test_trapz_full_time_second_moment()
  • Module contents
• tapsap.transient_analysis package
  • Submodules
  • tapsap.transient_analysis.concentration_g module
    • concentration_g()
  • tapsap.transient_analysis.concentration_units module
    • concentration_units()
  • tapsap.transient_analysis.concentration_y module
    • concentration_y()
  • tapsap.transient_analysis.postprocess_g module
    • postprocess_g()
  • tapsap.transient_analysis.rate_g module
    • rate_g()
  • tapsap.transient_analysis.rate_units module
    • rate_units()
  • tapsap.transient_analysis.rate_y module
    • rate_y()
  • tapsap.transient_analysis.uptake module
    • uptake()
  • Module contents
• tapsap.utils package
  • Submodules
  • tapsap.utils.filter_xl module
    • filter_xl()
  • tapsap.utils.find_integration_time module
    • find_integration_time()
  • tapsap.utils.gamma_pdf module
    • gamma_pdf()
  • tapsap.utils.isfloat module
    • isfloat()
  • tapsap.utils.isint module
    • isint()
  • tapsap.utils.isjson module
    • isjson()
  • tapsap.utils.islist module
    • islist()
  • tapsap.utils.mad module
    • mad()
  • tapsap.utils.rmse module
    • rmse()
  • tapsap.utils.trapz module
    • trapz()
  • Module contents

Module contents